Baas P, Hester M.W., Joye SB.  2013.  Benthic primary production and nitrogen cycling in Spartina alterniflora marshes impacted by acute dieback. Biogeochemistry. :DOI10.1007/s10533-013-9897-2.
Segarra K.E.A., Comerford C., Slaughter J., Joye SB.  2013.  Impact of electron acceptor availability on the anaerobic oxidation of methane in coastal freshwater and marine sediments. Geochimica et Cosmochimica Acta. 115:15-30.
Dekas AE, Chadwick G., Connon S., Bowles M., Joye SB, Orphan V.J..  2013.  Investigating methane seep nitrogen fixation at Mound 12, Costa Rica: Spatial distribution of diazotrophy and significance of the ANME archaea. Environmental Microbiology. 10:DOI10.1007/s10533-013-9897-2.
Osburn CL, Stedmon CA, Spencer RGM, Stubbins A.  2013.  Emerging Issues Workshop Report: Linking optical and chemical properties of dissolved organic matter in natural waters. Limnology and Oceanography Bulletin. (22):78-82.
Peterson R.N., Viso R.F., MacDonald I.R., Joye SB.  2013.  On the utility of radium isotopes as tracers of seafloor hydrocarbon discharge. Marine Chemistry. 10:
Feng D, Roberts H.H., Joye SB, Heydari E.  2013.  Formation of low-magnesium calcite at cold seeps in an aragonite sea. Terra Nova . 10:doi:10.111/ter.12081.
Hopkinson BM, Meile C, Shen C.  2013.  Quantification of extracellular carbonic anhydrase activity in two marine diatoms and investigation of its role. Plant physiology. 162:1142–1152.
Schutte C., Hunter K.S., McKay P., Di Iorio D., Joye S.B, Meile C.  2013.  Patterns and controls of nutrient concentrations in a southeastern United States tidal creek. Oceanography. 26(3):132-139.
Segarra K.E.A., Samarkin V., King E., Meile C., Joye SB.  2013.  Seasonal variations of methane fluxes from a tidal, freshwater sediment (Hammersmith Creek, GA). Biogeochemistry. 10:DOI10.1007/s10533-013-9840-6.
Rivers AA, Sharma S., Tringe S., Martin J., Joye SB, Moran MA.  2013.  Transcriptional response of bathypelagic marine bacteria to the Deepwater Horizon Oil Spill. The ISME Journal. 10:doi:10.1038/ismej.2013.129.